Course overview
- Study period
- Semester 1, 2025 (24/02/2025 - 21/06/2025)
- Study level
- Undergraduate
- Location
- St Lucia
- Attendance mode
- In Person
- Units
- 2
- Administrative campus
- St Lucia
- Coordinating unit
- The Environment School
In this intensive practical course, students will develop core genetic skills and will be given the opportunity to work independently within a supported scaffold. The course will be taught at a high level with students expected to take responsibility for all aspects of their practical work, much as would be required in a research or commercial lab. The core skills will be based around genetic research skills, with an additional emphasis on identifying and describing transferable skills relevant to future careers. Students will be required to make their stock solutions, calculate all dilutions, and conduct detailed trouble-shooting of results. Knowledge and experience gained at these core laboratory genetics skills will set students up well either for molecular laboratory-based employment or continuing study at honours level. Students will be mentored in the appropriate use of a laboratory notebook, as well as in lab safety and risk assessment. Students will be expected to present their results in descriptive, detailed and accurate reports. The advanced practical experiences will be designed around ongoing genetics research in the School of the Environment. Quota 48 (in total). Preference will given to students who have completed the pre-requisite course (BIOL2202/BIOL2902).
Course requirements
Assumed background
We assume that you have doneᅠsecond year genetics and will build on that knowledge.
Prerequisites
You'll need to complete the following courses before enrolling in this one:
BIOL2202 or BIOL2902
Recommended companion or co-requisite courses
We recommend completing the following courses at the same time:
BIOL3209, BIOL3004, BIOL3350
Restrictions
Maximum quota of 48
Course contact
Course staff
Lecturer
Tutor
Timetable
The timetable for this course is available on the UQ Public Timetable.
Additional timetable information
Practicals run weekly every Tuesday starting in week 1 through to week 12. Attendance at all practicals is essential.
Aims and outcomes
In this intensive practical course, students will develop core genetic skills and will be given the opportunity to work independently within a supported scaffold. The course will be taught at a high level with students expected to take responsibility for all aspects of their practical work, much as would be required in a research or commercial lab. The core skills will be based around genetic research skills, with an additional emphasis on identifying and describing transferable skills relevant to future careers. Students will be required to make their stock solutions, calculate all dilutions, and conduct detailed trouble-shooting of results. Knowledge and experience gained at these core laboratory genetics skills will set students up well either for molecular laboratory-based employment or continuing study at honours level. Students will be mentored in the appropriate use of a laboratory notebook, as well as in lab safety and risk assessment. Students will be expected to present their results in descriptive, detailed and accurate reports. The advanced practical experiences will be designed around ongoing genetics research in the School of the Environment.
Learning outcomes
After successfully completing this course you should be able to:
LO1.
Understand practical aspects of a broad range of subfields within genetics
LO2.
Gain useful skills for the workplace
LO3.
Collect and interpret data and communicate the results
LO4.
Work collaboratively
LO5.
Work independently
LO6.
Troubleshoot and resolve unexpected problems
LO7.
define a problem and develop and implement solutions
LO8.
understand how to interpret and display data with integrity
Assessment
Assessment summary
Category | Assessment task | Weight | Due date |
---|---|---|---|
Examination |
Experimental PCR exam
|
25% |
25/03/2025 |
Paper/ Report/ Annotation | Technical research report | 20% |
1/05/2025 2:00 pm |
Paper/ Report/ Annotation | Formal research paper | 20% |
30/05/2025 2:00 pm |
Examination |
Final exam
|
35% |
End of Semester Exam Period 7/06/2025 - 21/06/2025 |
A hurdle is an assessment requirement that must be satisfied in order to receive a specific grade for the course. Check the assessment details for more information about hurdle requirements.
Assessment details
Experimental PCR exam
- Identity Verified
- In-person
- Mode
- Written
- Category
- Examination
- Weight
- 25%
- Due date
25/03/2025
- Other conditions
- Time limited.
Task description
This exam will be held in class. It will cover the first 4 weeks including calculating concentrations and dilutions, troubleshooting results from a PCR experiment, primer design, temperature cycling conditions.
This assessment task is to be completed in-person. The use of generative Artificial Intelligence (AI) or Machine Translation (MT) tools will not be permitted. Any attempted use of AI or MT may constitute student misconduct under the Student Code of Conduct.
Exam details
Planning time | no planning time minutes |
---|---|
Duration | 60 minutes |
Calculator options | (In person) Casio FX82 series only or UQ approved and labelled calculator |
Open/closed book | Closed Book examination - no written materials permitted |
Exam platform | Paper based |
Invigilation | Invigilated in person |
Submission guidelines
Deferral or extension
You may be able to defer this exam.
See the Additional assessment information section further below for information relating to extension and deferral applications
Technical research report
- Mode
- Written
- Category
- Paper/ Report/ Annotation
- Weight
- 20%
- Due date
1/05/2025 2:00 pm
- Learning outcomes
- L01, L02, L03, L05, L06, L07, L08
Task description
Clarity of communication is essential! Having the ability to write in a simple and clear manner is a very valuable gift. In this task you will take data you have collected in class, analyse the outcomes and write a technical report.
This assessment task evaluates students' abilities, skills and knowledge without the aid of generative Artificial Intelligence (AI) or Machine Translation (MT). Students are advised that the use of AI or MT technologies to develop responses is strictly prohibited and may constitute student misconduct under the Student Code of Conduct.
Submission guidelines
Submit electronically through Turnitin. No hard copy or assignment coversheet required. Please keep your email receipt as proof of submission.
Deferral or extension
You may be able to apply for an extension.
The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.
See the Additional assessment information section further below for information relating to extension and deferral applications
Late submission
A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.
You are required to submit assessable items on time. If you fail to meet the submission deadline for any assessment item, then 10% of the maximum possible mark for the assessment item (assessment ‘marked from’ value) will be deducted as a late penalty for every day (or part day) late after the due date. For example, if you submit your assignment 1 hour late, you will be penalised 10%; if your assignment is 24.5 hours late, you will be penalised 20% (because it is late by one 24-hour period plus part of another 24-hour period).
Formal research paper
- Mode
- Written
- Category
- Paper/ Report/ Annotation
- Weight
- 20%
- Due date
30/05/2025 2:00 pm
- Learning outcomes
- L01, L02, L03, L04, L06, L07, L08
Task description
Published research papers are the primary medium though which scientific research information is exchanged. Typically, an important gap in knowledge is identified and investigated resulting in discoveries that lead to new understanding. Clarity of communication is essential! Having the ability to write in a simple and engaging manner is a very valuable gift.
Scientific research papers usually adhere to a very defined structure. By following this structure, any reader of your manuscript automatically knows where to look to find specific information. The defined structure usually includes strict word or page limits. During the course of this module, we will progbress through the writing of a scientific manuscript in stages. At the end of the module, you will submit the completed, polished and perfected manuscript.
This assessment task evaluates students' abilities, skills and knowledge without the aid of generative Artificial Intelligence (AI) or Machine Translation (MT). Students are advised that the use of AI or MT technologies to develop responses is strictly prohibited and may constitute student misconduct under the Student Code of Conduct.
Submission guidelines
Submit electronically through Turnitin. No hard copy or assignment coversheet required. Please keep your email receipt as proof of submission.
Deferral or extension
You may be able to apply for an extension.
The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.
See the Additional assessment information section further below for information relating to extension and deferral applications
Late submission
A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.
You are required to submit assessable items on time. If you fail to meet the submission deadline for any assessment item, then 10% of the maximum possible mark for the assessment item (assessment ‘marked from’ value) will be deducted as a late penalty for every day (or part day) late after the due date. For example, if you submit your assignment 1 hour late, you will be penalised 10%; if your assignment is 24.5 hours late, you will be penalised 20% (because it is late by one 24-hour period plus part of another 24-hour period).
Final exam
- Hurdle
- Identity Verified
- In-person
- Mode
- Written
- Category
- Examination
- Weight
- 35%
- Due date
End of Semester Exam Period
7/06/2025 - 21/06/2025
- Learning outcomes
- L01, L02, L06, L07, L08
Task description
This exam focusses on problem solving and utilisation of information and data rather than recall of facts.
Hurdle requirements
You must obtain an overall mark of 45% or more in the end of semester exam. If you do not meet these requirements, the maximum grade you will receive will be a 3.Exam details
Planning time | 10 minutes |
---|---|
Duration | 120 minutes |
Calculator options | (In person) Casio FX82 series only or UQ approved and labelled calculator |
Open/closed book | Closed Book examination - no written materials permitted |
Exam platform | Paper based |
Invigilation | Invigilated in person |
Submission guidelines
Deferral or extension
You may be able to defer this exam.
See the Additional assessment information section further below for information relating to extension and deferral applications
Course grading
Full criteria for each grade is available in the Assessment Procedure.
Grade | Description |
---|---|
1 (Low Fail) |
Absence of evidence of achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 0% |
2 (Fail) |
Minimal evidence of achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 30% |
3 (Marginal Fail) |
Demonstrated evidence of developing achievement of course learning outcomes Course grade description: The minimum percentage required for this grade is: 45% |
4 (Pass) |
Demonstrated evidence of functional achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 50% |
5 (Credit) |
Demonstrated evidence of proficient achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 65% |
6 (Distinction) |
Demonstrated evidence of advanced achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 75% |
7 (High Distinction) |
Demonstrated evidence of exceptional achievement of course learning outcomes. Course grade description: The minimum percentage required for this grade is: 85% |
Supplementary assessment
Supplementary assessment is available for this course.
Should you fail a course with a grade of 3, you may be eligible for supplementary assessment. Refer to my.UQ for information on supplementary assessment and how to apply.
Supplementary assessment provides an additional opportunity to demonstrate you have achieved all the required learning outcomes for a course.
If you apply and are granted supplementary assessment, the type of supplementary assessment set will consider which learning outcome(s) have not been met.
Supplementary assessment can take any form (such as a written report, oral presentation, examination or other appropriate assessment) and may test specific learning outcomes tailored to the individual student, or all learning outcomes.
To receive a passing grade of 3S4, you must obtain a mark of 50% or more on the supplementary assessment.
Additional assessment information
Submission of Assignments
Submission of assignments by email will NOT be accepted.
It is the responsibility of the student to ensure the on time, correct and complete submission of all assessment items.ᅠ
Please ensure you receive and save the submission confirmation for all submitted items, you may be asked to produce this as evidence of your submission.ᅠ
Turnitinᅠ
All written assessment must be submitted via the appropriate Turnitin submission portal, which can be found within the Blackboard site. You are responsible for ensuring that your submission is complete. It is wise to re-enter the Turnitin portal and confirm that your submission is there and that it has not been altered during the submission process.ᅠ
By submitting work through Turnitin you are deemed to have accepted the following declaration “I certify that this assignment is my own work and has not been submitted, either previously or concurrently, in whole or in part, to this University or any other educational institution, for marking or assessment”.ᅠ
In the case of a Blackboard outage, please contact the Course Coordinator as soon as possible to confirm the outage with ITS.ᅠ
Plagiarism
You should be aware that the University employs purpose built software to detect plagiarism. It is very important that you understand clearly the practical meaning of plagiarism.
DEFINITION OF PLAGIARISM: Plagiarism is the act of misrepresenting as one's own original work the ideas, interpretations, words or creative works of another. These include published and unpublished documents, designs, music, sounds, images, photographs, computer codes and ideas gained through working in a group. These ideas, interpretations, words or works may be found in print and/or electronic media.
EXAMPLES OF PLAGIARISM:
1. Direct copying of paragraphs, sentences, a single sentence or significant parts of a sentence;
2. Direct copying of paragraphs, sentences, a single sentence or significant parts of a sentence with an end reference but without quotation marks around the copied text;
3. Copying ideas, concepts, research results, computer codes, statistical tables, designs, images, sounds or text or any combination of these;
4. Paraphrasing, summarising or simply rearranging another person's words, ideas, etc without changing the basic structure and/or meaning of the text;
5. Offering an idea or interpretation that is not one's own without identifying whose idea or interpretation it is;
6. A 'cut and paste' of statements from multiple sources;
7. Presenting as independent, work done in collaboration with others;
8. Copying or adapting another student's original work into a submitted assessment item.
Artificial Intelligence use (AI)
The assessment tasks in this course evaluate students’ abilities, skills, and knowledge without the aid of Artificial Intelligence (AI).
Students are advised that the use of AI technologies to develop responses is strictly prohibited and may constitute misconduct under the Student Code of Conduct.
Applications for Extensions to Assessment Due Dates
Extension requests are submitted online via my.UQ – applying for an extension. Extension requests received in any other way will not be approved. Additional details associated with extension requests, including acceptable and unacceptable reasons, may be found at my.UQ.
Please note:
- Requests for an extension to an assessment due date must be submitted through your my.UQ portal and you must provide documentation of your circumstances, as soon as it becomes evident that an extension is needed. Your application must be submitted on or before the assessment item's due date and time.
- Applications for extension can take time to be processed so you should continue to work on your assessment item while awaiting a decision. We recommend that you submit any completed work by the due date, and this will be marked if your application is not approved. Should your application be approved, then you will be able to resubmit by the agreed revised due date.
- If an extension is approved, you will be notified via your my.UQ portal and the new date and time for submission provided. It is important that you check the revised date as it may differ from the date that you requested.
- If the basis of the application is a medical condition, applications should be accompanied by a medical certificate dated prior to the assignment due date. If you are unable to provide documentation to support your application by the due date and time you must still submit your application on time and attach a written statement (Word document) outlining why you cannot provide the documentation. You must then upload the documentation to the portal within 24 hours.
- If an extension is being sought on the basis of exceptional circumstances, it must be accompanied by supporting documentation (eg. Statutory declaration).
- For extensions based on a SAP you may be granted a maximum of 7 days (if no earlier maximum timeframe applies). See the Extension or Deferral availability section of each assessment for timeframes. Your SAP is all that is required as documentation to support your application. However, additional extension requests for the assessment item will require the submission of additional supporting documentation e.g., a medical certificate. All extension requests must be received by the assessment due date and time.
- An extension for an assessment item due within the teaching period in which the course is offered, must not exceed four weeks in total. If you are incapacitated for a period exceeding four weeks of the teaching period, you are advised to apply for Removal of Course.
- If you have been ill or unable to attend class for more than 4 weeks, you are advised to carefully consider whether you are capable of successfully completing your courses this semester. You might be eligible to withdraw without academic penalty - seek advice from the Faculty that administers your program.
- Students may be asked to submit evidence of work completed to date. Lack of adequate progress on your assessment item may result in an extension being denied.
- There are no provisions for exemption from an assessment item within UQ rules. If you are unable to submit an assessment piece then, under special circumstances, you may be granted an exemption but may be required to submit alternative assessment to ensure all learning outcomes are met.
Applications to defer an exam
In certain circumstances you can apply to take a deferred examination for in-semester and end-of-semester exams. You'll need to demonstrate through supporting documentation how unavoidable circumstances prevented you from sitting your exam. If you can’t, you can apply for a one-off discretionary deferred exam.
Deferred Exam requests are submitted online via mySi-net. Requests received in any other way will not be approved. Additional details associated with deferred examinations, including acceptable and unacceptable reasons may be found at my.UQ.
Please note:
- Applications can be submitted no later than 5 calendar days after the date of the original exam.
- There are no provisions to defer a deferred exam. You need to be available to sit your deferred examination.
- Your deferred examination request(s) must have a status of "submitted" in mySI-net to be assessed.
- All applications for deferred in-semester examinations are assessed by the relevant school. Applications for deferred end-of-semester examinations are assessed by the Academic Services Division.
- You’ll receive an email to your student email account when the status of your application is updated.
- If you have a medical condition, mental health condition or disability and require alternative arrangements for your deferred exam you’ll need to complete the online alternative exam arrangements through my.UQ. This is in addition to your deferred examinations request. You need to submit this request on the same day as your request for a deferred exam or supplementary assessment. Contact Student Services if you need assistance completing your alternative exam arrangements request.
Learning resources
You'll need the following resources to successfully complete the course. We've indicated below if you need a personal copy of the reading materials or your own item.
Library resources
Library resources are available on the UQ Library website.
Other course materials
If we've listed something under further requirement, you'll need to provide your own.
Required
Item | Description | Further Requirement |
---|---|---|
Lab coat | own item needed | |
Safety glasses | own item needed | |
Closed in shoes | own item needed |
Learning activities
The learning activities for this course are outlined below. Learn more about the learning outcomes that apply to this course.
Filter activity type by
Please select
Learning period | Activity type | Topic |
---|---|---|
Multiple weeks |
General contact hours |
Mod 3 - Discovery Science Define an hypothesis. Learning outcomes: L02, L03, L04, L05, L06, L07, L08 |
Multiple weeks From Week 1 To Week 5 |
Practical |
Mod 1-PCR immersion experience PCR immersion experience and transferable skill development Learning outcomes: L01, L02, L03, L05, L06, L07, L08 |
Week 1 (24 Feb - 02 Mar) |
Practical |
Week 1 Course overview (mini-lecture) Careers in science and the importance of soft skills (Discussion) PCR the process and experimental methods (Discussion) Designing PCR primers (Practical) Lab safety and induction Learning outcomes: L01, L02, L05, L07 |
Week 2 (03 Mar - 09 Mar) |
Practical |
Week 2
|
Week 4 (17 Mar - 23 Mar) |
Practical |
Week 3
Learning outcomes: L01, L02, L03, L05, L06, L07, L08 |
Week 5 (24 Mar - 30 Mar) |
Practical |
Week 4
Learning outcomes: L02, L03, L05, L06, L08 |
Multiple weeks From Week 6 To Week 8 |
Practical |
Mod 2 - Analysis and validation This module is primarily project based in which students will initially learn about various ways to determine differential gene expression when two or more treatments/conditions are compared. A powerful and commonly used technique is quantitative reverse transcription PCR (qRT-PCR). The theory, experimental design and application of the technique will be discussed, and to put it into practice, in this mini-project, you will be involved in the experimental design, gene selection, primer design, and trouble shootings in validating published deep sequencing data from blood-fed and non-blood fed mosquito transcriptomes centred around qRT-PCR. Learning outcomes: L01, L02, L03, L04, L05, L06, L07, L08 |
Week 6 (31 Mar - 06 Apr) |
Practical |
Week 6 - Starting the experiments Discussion on differential gene expression and approaches in measuring and validating differential gene expression (qRT-PCR) Learning outcomes: L01, L02, L03, L04, L05, L06, L07 |
Week 7 (07 Apr - 13 Apr) |
Practical |
Week 7 Reverse transcription, validation of primers, trouble shooting, preparing qPCR plan Learning outcomes: L01, L02, L03, L04, L05, L06, L07, L08 |
Week 8 (14 Apr - 20 Apr) |
Practical |
Week 8 qPCR, data analysis, trouble shooting, report writing Learning outcomes: L01, L02, L03, L04, L05, L06, L07, L08 |
Week 9 (28 Apr - 04 May) |
Practical |
Week 9a - Designing a discovery project
Learning outcomes: L02, L07 |
Practical |
Week 9b Preparing for the project & starting worm cultures Learning outcomes: L02, L04, L06 |
|
Week 10 (05 May - 11 May) |
Practical |
Week 10 - Starting the experiments
Learning outcomes: L02, L03, L04, L05, L06, L08 |
Week 11 (12 May - 18 May) |
Practical |
Week 11-Data collection,writing results,discussion Learning outcomes: L02, L03, L04, L05, L06, L08 |
Week 12 (19 May - 25 May) |
Practical |
Week 12 -Final C. elegans experimental week Learning outcomes: L02, L03, L04, L05, L06, L08 |
Policies and procedures
University policies and procedures apply to all aspects of student life. As a UQ student, you must comply with University-wide and program-specific requirements, including the:
- Student Code of Conduct Policy
- Student Integrity and Misconduct Policy and Procedure
- Assessment Procedure
- Examinations Procedure
- Reasonable Adjustments - Students Policy and Procedure
Learn more about UQ policies on my.UQ and the Policy and Procedure Library.