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Course profile

Introduction to Big Data Biological Research (QBIO7007)

Study period
Sem 2 2024
Location
External
Attendance mode
Online

Course overview

Study period
Semester 2, 2024 (22/07/2024 - 16/11/2024)
Study level
Postgraduate Coursework
Location
External
Attendance mode
Online
Units
2
Administrative campus
St Lucia
Coordinating unit
The Environment School

During the last semester of the Masters of Quantitative Biology students will conduct a research project with an academic at UQ, or will work directly with an industry partner outside UQ. In this introductory intense course, students will learn how research and work with big data in Biology works. Students will learn the demands, expectations, ethics, and strategies employers apply to new recruits, and will learn how to maximise their chances of gaining working and academic opportunities in the future.
This course is restricted to students enrolled in the Master of Quantitative Biology programs.

Current job demands in academia, government, and industry are changing rapidly. Students will be introduced to diverse aspects of the research and professional landscape awaiting quantitative biology graduates. The course will include modules on research ethics, career pathways, writing grants and tenders, critical analysis of the literature, and professionalism. This course will serve as foundation for their research or industry placement in the final semester of the Master of Quantitative Biology.

Course requirements

Prerequisites

You'll need to complete the following courses before enrolling in this one:

QBIO7001, and at least three courses from QBIO7002, QBIO7003, QBIO7004, QBIO7005 & QBIO7006

Course contact

Course staff

Lecturer

Timetable

The timetable for this course is available on the UQ Public Timetable.

Aims and outcomes

This course aims toᅠshowcase the diversity of career pathways taken by quantitative biologists and to foster the professional and research skills expected by industry and academic employers.ᅠ

Learning outcomes

After successfully completing this course you should be able to:

LO1.

Be familiar with career pathways, and topics of speciality, that can lead to employment as a quantitative biologist in industry or academia.

LO2.

Appreciate the importance of the scientific method, ethics, and integrity to any research career.

LO3.

Critically analyze and communicate cutting-edge research in quantitative biology.

LO4.

Understand how skills gained in previous quantitative biology courses are implemented across a broad spectrum of biological research fields.

LO5.

Deliver a competitive CV, cover letter and interview for a prospective job in quantitative biology

Assessment

Assessment summary

Category Assessment task Weight Due date
Paper/ Report/ Annotation Critical thinking: paper questions
  • In-person
  • Online
4%

8/07/2024 - 11/07/2024

Presentation Critical thinking: topics in quantitative biology
  • In-person
  • Online
20%

8/07/2024 - 11/07/2024

Paper/ Report/ Annotation News and Views 36%

15/07/2024 5:00 pm

Paper/ Report/ Annotation, Presentation CV, cover letter and interview 40% CV (10%), cover letter (10%), interview (20%)

12/07/2024 5:00 pm

Please submit you CV and cover letter via Turnitin by 5 pm on 12 July 2024. Your face-to-face interview will be held on 17 July 2024.

Assessment details

Critical thinking: paper questions

  • In-person
  • Online
Mode
Written
Category
Paper/ Report/ Annotation
Weight
4%
Due date

8/07/2024 - 11/07/2024

Learning outcomes
L02, L03, L04

Task description

For the papers that you are not presenting, prior to each session, you will submit two questions arising from each papers. These should be thoughtful questions about the research conducted and reported in the paper and be accompanied by a short justification or explanation. Please submit this via Turnitin by 9 am on the day of the session. These questions are to ensure all students are prepared for a deep and lively discussion of the papers. You can gain a total of 1 mark per paper (2 questions and justifications per paper) and your best 4 out of 6 submissions will be counted towards your final grade.

Submission guidelines

Please submit this via Turnitin by 9 am on the day of the session.

Deferral or extension

You may be able to apply for an extension.

The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.

Late submission

A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.

Critical thinking: topics in quantitative biology

  • In-person
  • Online
Mode
Oral
Category
Presentation
Weight
20%
Due date

8/07/2024 - 11/07/2024

Learning outcomes
L02, L03, L04

Task description

Each session will involve discussion of two papers (45-60 mins for each). Each of you will chair (or co-chair) the discussion of two papers (they cannot be on the same topic). As chair, we will ask you to begin with a ~10 minute ‘journal club style’ presentation outlining the study question, the main (or most important) methods used and the conclusions drawn. This will be followed by open discussion of the paper. Each journal club presentation will comprise 10% of your final mark for the course. You are expected to read all papers in advance even if you are not the chair! This format mirrors a typical weekly meeting for research groups where discussing publications is an important aspect of staying current in science.

Submission guidelines

Each journal club presentation will comprise 10% of your final mark for the course.

Deferral or extension

You may be able to apply for an extension.

The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.

Late submission

A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.

News and Views

Mode
Written
Category
Paper/ Report/ Annotation
Weight
36%
Due date

15/07/2024 5:00 pm

Learning outcomes
L02, L03

Task description

Paper summary (sensu News and Views)

Submission guidelines

Please submit this via Turnitin.

Deferral or extension

You may be able to apply for an extension.

The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.

Late submission

A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.

CV, cover letter and interview

Mode
Oral, Written
Category
Paper/ Report/ Annotation, Presentation
Weight
40% CV (10%), cover letter (10%), interview (20%)
Due date

12/07/2024 5:00 pm

Please submit you CV and cover letter via Turnitin by 5 pm on 12 July 2024. Your face-to-face interview will be held on 17 July 2024.

Learning outcomes
L01, L05

Task description

You will submit your curriculum vitae (cv), cover letter for a job application, and attend an interview.

 

In preparation for this assessment task, you will be provided:

  • a position description for a job opportunity that you will apply for
  • an appointment for an interview (in person or via Zoom)
  • some guidelines on how to prepare for the interview

 

In preparation for this assessment task, you should:

  • update your cv
  • prepare a one-page cover letter to address selection criteria outlined in the job opportunity
  • collate your cv and cover letter into one document and submit it (via Turnitin) by the due date

 

During your interview, you should:

  • respond to interview questions asked by your interview panellists
  • ask any questions you may have about the job opportunity

 

After this assessment, you will be provided:

  • personalised feedback on your performance and suggestions for improvement

Submission guidelines

Please submit you CV and cover letter via Turnitin by 5 pm on 12 July 2024. Your face-to-face interview will be held on 17 July 2024.

Deferral or extension

You may be able to apply for an extension.

The maximum extension allowed is 28 days. Extensions are given in multiples of 24 hours.

Late submission

A penalty of 10% of the maximum possible mark will be deducted per 24 hours from time submission is due for up to 7 days. After 7 days, you will receive a mark of 0.

Course grading

Full criteria for each grade is available in the Assessment Procedure.

Grade Description
1 (Low Fail)

Absence of evidence of achievement of course learning outcomes.

Course grade description: <p>The minimum percentage required for this grade is: 0%</p>

2 (Fail)

Minimal evidence of achievement of course learning outcomes.

Course grade description: The minimum percentage required for this grade is: 30%

3 (Marginal Fail)

Demonstrated evidence of developing achievement of course learning outcomes

Course grade description: The minimum percentage required for this grade is: 45%

4 (Pass)

Demonstrated evidence of functional achievement of course learning outcomes.

Course grade description: <p>50</pa>

5 (Credit)

Demonstrated evidence of proficient achievement of course learning outcomes.

Course grade description: <p>65</p>

6 (Distinction)

Demonstrated evidence of advanced achievement of course learning outcomes.

Course grade description: <p>75</p>

7 (High Distinction)

Demonstrated evidence of exceptional achievement of course learning outcomes.

Course grade description: <p>85</p>

Supplementary assessment

Supplementary assessment is available for this course.

Additional assessment information

Applications for Extensions

Information on applying for an extension can be found here - my.UQ Applying for an extension

Extension applications must be received by the assessment due date and time.

If you are unable to provide documentation to support your application by the due date and time you must still submit your application on time and attach a Word document outlining why you cannot provide the documentation and upload the documentation to the portal within 24 hours.

Please note: While your extension request is being considered, you should work towards completing and submitting your assessment as soon as possible.

If you have been ill or unable to attend class for more than 4 weeks in a semester, we advise you to carefully consider whether you are capable of successfully completing your courses. You might need to consider applying for removal of course. We strongly recommend you seek advice from the Faculty that administers your program.

 

Extensions with Student Access Plans (SAP)

For extensions up to 7 days, your SAP is all that is required as documentation to support your application. However, extension requests longer than 7 days (for any one assessment item) will require the submission of additional supporting documentation e.g., a medical certificate. A maximum of two applications may be submitted for any one assessment item, unless exceptional circumstances can be demonstrated. All extension requests must be received by the assessment due date and time. 


ARTIFICIAL INTELLIGENCE USE (AI)

The assessment tasks in this course evaluate students’ abilities, skills, and knowledge without the aid of Artificial Intelligence (AI).

Students are advised that the use of AI technologies to develop responses is strictly prohibited and may constitute misconduct under the Student Code of Conduct.

Learning resources

You'll need the following resources to successfully complete the course. We've indicated below if you need a personal copy of the reading materials or your own item.

Library resources

Library resources are available on the UQ Library website.

Learning activities

The learning activities for this course are outlined below. Learn more about the learning outcomes that apply to this course.

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Learning period Activity type Topic
Workshop

Professionalism 1

Riginos

Learning outcomes: L01, L05

Workshop

Professionalism 2

Riginos

Learning outcomes: L01, L05

Workshop

Research pathways academic, industry, government

Panel discussion of practitioners from academia, industry, government, and education - facilitated by Hart

Learning outcomes: L02

Workshop

Ethics and integrity

Ortiz-Barrientos and Engelstaedter

Learning outcomes: L01, L04, L05

Workshop

Writing grants and tenders

Hart

Learning outcomes: L03

Workshop

Critical thinking 1

(Riginos)

Learning outcomes: L03

Workshop

Critical thinking 2

(Ortiz-Barrientos & Riginos)

Learning outcomes: L03

Workshop

Critical thinking 3

(Engelstaedter and Riginos)

Learning outcomes: L03

Workshop

Critical thinking 4

(McGuigan and Riginos)

Learning outcomes: L01

Workshop

Perspectives on a career in quantitative biology

Panel discussion (Riginos and guests)

Learning outcomes: L01, L04

Policies and procedures

University policies and procedures apply to all aspects of student life. As a UQ student, you must comply with University-wide and program-specific requirements, including the:

Learn more about UQ policies on my.UQ and the Policy and Procedure Library.